HUPO Association

B/D HPP
Human Liver Proteome Project (HLPP)

GET INVOLVED: Get in touch at office@hupo.org to learn more
Mission & Goals

The HLPP is a major international initiative dedicated to creating a comprehensive map of the human liver proteome. Its core purpose is to systematically identify and catalogue all liver proteins, including their various forms, modifications, and interactions, while mapping their spatiotemporal localization in both health and disease.

By correlating these protein expression patterns with conditions like hepatitis, cirrhosis, and cancer, the HLPP aims to fundamentally enhance our understanding of liver biology and disease mechanisms. This foundational knowledge is critical for discovering novel biomarkers for early diagnosis and for identifying new therapeutic targets.

The project’s importance lies in its commitment to advancing precision medicine for liver diseases, ultimately paving the way for improved diagnostics, personalized treatments, and preventative strategies through the development of a public database and the fostering of global collaborative networks.

In the pipeline:

  • To identify and catalog all proteins expressed in the human liver, including their isoforms and post-translational modifications.
  • Discover and validate new biomarkers for liver diseases facilitating early diagnosis, prognostic risk assessment and treatment decision.
  • To identify and validate the drug-targetable proteins for further targeted treatment of liver diseases.
  • Database Development: Create a publicly accessible database of the liver proteome, including protein sequences, structures, functions, and associated clinical data.
  • Establish international collaborations with researchers, clinicians, institutions and industries to share knowledge, resources, and technologies, enhancing the project’s impact and reach.

We gratefully acknowledge all investigators, clinicians, patients, and collaborating institutions who have contributed to advancing the HLPP through data generation, technology development, and translational research. We especially thank the international partners within the Human Proteome Organization and the Human Liver Proteome Project community for their continuous leadership in standardizing liver proteomics, promoting multi-omics integration, and fostering global data sharing.

As liver diseases—including viral hepatitis, metabolic dysfunction–associated steatotic liver disease, cirrhosis, and hepatocellular carcinoma—remain major global health burdens, we warmly encourage research groups, clinicians, bioinformaticians, and industry partners worldwide to join HLPP. By contributing high-quality liver proteomic datasets, innovative technologies, and collaborative expertise, new partners can help accelerate the construction of comprehensive human liver proteome maps, advance biomarker discovery, and promote precision medicine for liver diseases.

HLPP Membership
For more information or participation opportunities please contact us.
Leadership Information

Co-Chair:
Ying Jiang
National Center of Protein Sciences (Beijing), Beijing 102206, China

Co-Chair:
Fernando J. Corrales,
Centro Nacional de Biotecnología – CSIC, Proteored-ISCIII, Madrid 28049, Spain

Executive Committee Members:

  • Fuchu He (National Center of Protein Sciences (Beijing),China); former Chair;
  • Zuhua Gao (University of British Columbia, Vancouver, BC, Canada); Liver pathologist;
  • Andre Boonstra (Erasmus MC University Medical Center, Rotterdam, The Netherlands); Research on liver disease biomarkers;
  • Felix Elortza(National Institute for the Study of Liver and Gastrointestinal Diseases (CIBERehd), ISCIII, Madrid, Spain); Proteomics platform;
  • Xiushan Yin (RocRock Biotechnology Co., Ltd, China); Translational proteomics;
  • Feng Shen (Eastern Hepatobiliary Surgery Hospital, Shanghai, China); Liver surgery
  • Qiang Gao (Zhongshan Hospital, Fudan University, Shanghai, China); Liver surgery and transplantation
  • Junjie Xu (Sir Run-Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou, China); Liver surgery and transplantation
  • Jinlin Hou (Nanfang Hospital, Southern Medical University, Guangzhou; China); Infectious diseases and liver diseases
  • Xiaolong Liu (Mengchao Hepatobiliary Hospital of Fujian Medical University, Fuzhou, China); Diagnostic markers for liver diseases
  • Yunping Zhu (National Center of Protein Sciences (Beijing),China); Proteome database
  • Weijie Qin (National Center of Protein Sciences (Beijing),China); Spatial proteome
  • Wantao Ying (National Center of Protein Sciences (Beijing),China); New technologies in proteomics
  • Jinna Dai (National Clinical Research Center for Laboratory Medicine, The First Affiliated Hospital of China Medical University, Shenyang, China); Mass spectrometry precision medicine

Publications:

Liver cancer-associated changes to the proteome: what deserves clinical focus?
Bioengineered PBGD variant improves the therapeutic index of gene therapy vectors for acute intermittent porphyria
Abundance of Cytochromes in Hepatic Extracellular Vesicles Is Altered by Drugs Related With Drug-Induced Liver Injury
SUMOylation regulates LKB1 localization and its oncogenic activity in liver cancer
Prohibitin 1 Acts As a Negative Regulator of Wingless/Integrated-Beta-Catenin Signaling in Murine Liver and Human Liver Cancer Cells
Obeticholic Acid Modulates Serum Metabolites and Gene Signatures Characteristic of Human NASH and Attenuates Inflammation and Fibrosis Progression in Ldlr-/-Leiden Mice
The mitochondrial chaperone Prohibitin 1 negatively regulates interleukin-8 in human liver cancers
MiR-873-5p acts as an epigenetic regulator in early stages of liver fibrosis and cirrhosis
Repurposing ciclopirox as a pharmacological chaperone in a model of congenital erythropoietic porphyria
Fine-tuning of SIRT1 expression is essential to protect the liver from cholestatic liver disease
Liver cancer-associated changes to the proteome: what deserves clinical focus?
Metabolomic-based noninvasive serum test to diagnose nonalcoholic steatohepatitis: Results from discovery and validation cohorts
Mechanisms of MAFG Dysregulation in Cholestatic Liver Injury and Development of Liver Cancer
Use of a metabolomic approach to non-invasively diagnose non-alcoholic fatty liver disease in patients with type 2 diabetes mellitus
Direct-acting antivirals-based therapy decreases hepatic fibrosis serum biomarker microfibrillar-associated protein 4 in hepatitis C patients
Liver cancer cell lines distinctly mimic the metabolic gene expression pattern of the corresponding human tumours
A MAA-based dosimetric study in patients with intrahepatic cholangiocarcinoma treated with a combination of chemotherapy and 90Y-loaded glass microsphere selective internal radiation therapy
Direct Quantification of Cytochromes P450 and Drug Transporters-A Rapid, Targeted Mass Spectrometry-Based Immunoassay Panel for Tissues and Cell Culture Lysates
Mixture effects of two plant protection products in liver cell lines
Targeting Endothelial Erk1/2-Akt Axis as a Regeneration Strategy to Bypass Fibrosis during Chronic Liver Injury in Mice
ER-associated ubiquitin ligase HRD1 programs liver metabolism by targeting multiple metabolic enzymes
Artificial MicroRNA-Mediated Tgfbr2 and Pdgfrb Co-Silencing Ameliorates Carbon Tetrachloride-Induced Hepatic Fibrosis in Mice
Germline Duplication of SNORA18L5 Increases Risk for HBV-related Hepatocellular Carcinoma by Altering Localization of Ribosomal Proteins and Decreasing Levels
A proteomics landscape of circadian clock in mouse liver
Dysregulated Response of Follicular Helper T Cells to Hepatitis B Surface Antigen Promotes HBV Persistence in Mice and Associates With Outcomes of Patients

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