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HPP Archive Manuscripts 

2015

  • Citrullination of myofilament proteins in heart failure. Fert-Bober J, Giles JT, Holewinski RJ, Kirk JA, Uhriqshardt H, Crowgey EL, Andrade F, Bingham CO, Park JK, Hallushka MK, KAss DA, Bathon JM, Van Eyke JE. 2015 Nov 1;108(2):232-42. doi: 10.1093/cvr/cvv185. Epub 2015 Jun 25.

2014


  • 38 new HPP publications in 2nd annual C-HPP special issue of the Journal of Proteome Research, January 2014 and April 2014
  • Proteogenomic characterization of human colon and rectal cancer. Bing Zhang, Jing Wang, Xiaojing Wang, Jing Zhu, Qi Liu, Zhiao Shi, Matthew C. Chambers, Lisa J. Zimmerman, Kent F. Shaddox, Sangtae Kim, Sherri R. Davies, Sean Wang, Pei Wang, Christopher R. Kinsinger, Robert C. Rivers, Henry Rodriguez, R. Reid Townsend, Matthew J. C. Ellis, Steven A. Carr, David L. Tabb, Robert J. Coffey, Robbert J. C. Slebos, Daniel C. Liebler & the NCI CPTAC. Nature 513, 382–387 (18 September 2014) doi:10.1038/nature13438

2013

  • 48 HPP publications in 1st annual C-HPP special issue of the Journal of Proteome Research, January 2013 and June 2013
  • CAPER: a Chromosome-Assembled human Proteome browsER- Feifei Guo, Dan Wang, Zhongyang Liu, Liang Lu, Wei Zhang, Haiyan Sun, Hongxing Zhang, Jie Ma, Songfeng Wu, Ning Li, Ying Jiang, Weimin Zhu, Jun Qin, Ping Xu, Dong Li, and Fuchu He (2013) Journal of Proteome Research special issue 2013
  • The Proteome Browser Web Portal- Robert J. A. Goode, Simon Yu, Anitha Kannan, Jeffrey H. Christiansen, Anthony Beitz, William S. Hancock, Edouard Nice, and A. Ian Smith (2013) Journal of Proteome Research special issue 2013
  • Qualitative and Quantitative Expression Status of the Human Chromosome 20 Genes in Cancer Tissues and the Representative Cell Lines- Quanhui Wang, Bo Wen, Guangrong Yan, Junying Wei, Liqi Xie, Shaohang Xu, Dahai Jiang, Tingyou Wang, Liang Lin, Jin Zi, Ju Zhang, Ruo Zhou, Haiyi Zhao, Zhe Ren, Nengrong Qu, Xiaomin Lou, Haidan Sun, Chaoqin Du, Chuangbin Chen, Shenyan Zhang, Fengji Tan, Youqi Xian, Zhibo Gao, Minghui He, Longyun Chen, Xiaohang Zhao, Ping Xu, Yunping Zhu, Xingfeng Yin, Huali Shen, Yang Zhang, Jing Jiang, Chengpu Zhang, Liwei Li, Cheng Chang, Jie Ma, Guoquan Yan, Jun Yao, Haojie Lu, Wantao Ying, Fan Zhong, Qing-Yu He, and Siqi Liu (2013) Journal of Proteome Research special issue 2013
  • Chromosome 19 Annotations with Disease Speciation: A First Report from the Global Research Consortium- Carol L. Nilsson, Frode Berven, Frode Selheim, Huiling Liu, Joseph R. Moskal, Roger A. Kroes, Erik P. Sulman, Charles A. Conrad, Frederick F. Lang, Per E. Andrén, Anna Nilsson, Elisabet Carlsohn, Hans Lilja, Johan Malm, David Fenyö, Devipriya Subramaniyam, Xiangdong Wang, Maria Gonzales-Gonzales, Noelia Dasilva, Paula Diez, Manuel Fuentes, Ákos Végvári, Karin Sjödin, Charlotte Welinder, Thomas Laurell, Thomas E. Fehniger, Henrik Lindberg, Melinda Rezeli, Goutham Edula, Sophia Hober, and György Marko-Varga (2013) Journal of Proteome Research special issue 2013
  • Chromosome 18 Transcriptome Profiling and Targeted Proteome Mapping in Depleted Plasma, Liver Tissue and HepG2 Cells- Victor G. Zgoda, Arthur T. Kopylov, Olga V. Tikhonova, Alexander A. Moisa, Nadezhda V. Pyndyk, Tatyana E. Farafonova, Svetlana E. Novikova, Andrey V. Lisitsa, Elena A. Ponomarenko, Ekaterina V. Poverennaya, Sergey P. Radko, Svetlana A. Khmeleva, Leonid K. Kurbatov, Aleksey D. Filimonov, Nadezhda A. Bogolyubova, Ekaterina V. Ilgisonis, Aleksey L. Chernobrovkin, Alexis S. Ivanov, Alexei E. Medvedev, Yury V. Mezentsev, Sergei A. Moshkovskii, Stanislav N. Naryzhny, Elena N. Ilina, Elena S. Kostrjukova, Dmitry G. Alexeev, Alexander V. Tyakht, Vadim M. Govorun, and Alexander I. Archakov (2013) Journal of Proteome Research special issue 2013. Presented data available: PXD000085, PXD000091, PXD000092, PXD000093
  • Spanish Human Proteome Project: Dissection of Chromosome 16 - V. Segura, J. A. Medina-Aunon, E. Guruceaga, S. I. Gharbi, C. González-Tejedo, M. M. Sánchez del Pino, F. Canals, M. Fuentes, J. Ignacio Casal, S. Martínez-Bartolomé, F. Elortza, J. M. Mato, J. M. Arizmendi, J. Abian, E. Oliveira, C. Gil, F. Vivanco, F. Blanco, J. P. Albar, and F. J. Corrales (2013) Journal of Proteome Research special issue 2013. Presented datasets available: PXD000039
  • Chromosome 11-Centric Human Proteome Analysis of Human Brain Hippocampus Tissue- Kyung-Hoon Kwon, Jin Young Kim, Se-Young Kim, Hye Kyeong Min, Hyoung-Joo Lee, In Jung Ji, Taewook Kang, Gun Wook Park, Hyun Joo An, Bonghee Lee, Rivka Ravid, Isidro Ferrer, Chun Kee Chung, Young-Ki Paik, William S. Hancock, Young Mok Park, and Jong Shin Yoo (2013) Journal of Proteome Research special issue 2013
  • First Proteomic Exploration of Protein-Encoding Genes on Chromosome 1 in Human Liver, Stomach, and Colon - Songfeng Wu, Ning Li, Jie Ma, Huali Shen, Dahai Jiang, Cheng Chang, Chengpu Zhang, Liwei Li, Hongxing Zhang, Jing Jiang, Zhongwei Xu, Lingyan Ping, Tao Chen, Wei Zhang, Tao Zhang, Xiaohua Xing, Tailong Yi, Yanchang Li, Fengxu Fan, Xiaoqian Li, Fan Zhong, Quanhui Wang, Yang Zhang, Bo Wen, Guoquan Yan, Liang Lin, Jun Yao, Zhilong Lin, Feifei Wu, Liqi Xie, Hongxiu Yu, Mingqi Liu, Haojie Lu, Hong Mu, Dong Li, Weimin Zhu, Bei Zhen, Xiaohong Qian, Jun Qin, Siqi Liu, Pengyuan Yang, Yunping Zhu, Ping Xu, and Fuchu He (2013) Journal of Proteome Research special issue 2013
  • A Chromosome-centric Human Proteome Project (C-HPP) to Characterize the Sets of Proteins Encoded in Chromosome 17- Suli Liu, Hogune Im, Amos Bairoch, Massimo Cristofanilli, Rui Chen, Eric W. Deutsch, Stephen Dalton, David Fenyo, Susan Fanayan, Chris Gates, Pascale Gaudet, Marina Hincapie, Samir Hanash, Hoguen Kim, Seul-Ki Jeong, Emma Lundberg, George Mias, Rajasree Menon, Zhaomei Mu, Edouard Nice, Young-Ki Paik, Mathias Uhlen, Lance Wells, Shiaw-Lin Wu, Fangfei Yan, Fan Zhang, Yue Zhang, Michael Snyder, Gilbert S. Omenn, Ronald C. Beavis, and William S. Hancock (2013) Journal of Proteome Research special issue 2013
  • A Fresh Look at the Male-specific Region of the Human Y Chromosome- Zohreh Jangravi, Mehdi Alikhani, Babak Arefnezhad, Mehdi Sharifi Tabar, Sara Taleahmad, Razieh Karamzadeh, Mahdieh Jadaliha, Seyed Ahmad Mousavi, Diba Ahmadi Rastegar, Pouria Parsamatin, Haghighat Vakilian, Shahab Mirshahvaladi, Marjan Sabbaghian, Anahita Mohseni Meybodi, Mehdi Mirzaei, Maryam Shahhoseini, Marzieh Ebrahimi, Abbas Piryaei, Ali Akbar Moosavi-Movahedi, Paul A. Haynes, Ann K. Goodchild, Mohammad Hossein Nasr-Esfahani, Esmaiel Jabbari, Hossein Baharvand, Mohammad Ali Sedighi Gilani, Hamid Gourabi, and Ghasem Hosseini Salekdeh (2013) Journal of Proteome Research special issue 2013

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